strudel is an actively used text data format created in 2011. Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The Strudel data format is tab delimited text with all features, homologs and potential reference URLs included in the same file.
- strudel first appeared in 2011
- Have a question about strudel not answered here? Email me and let me know how I can help.
Example code from the web:
feature Rice 1 LOC_Os05g01020 gene 1903 "TBC domain containing protein, expressed" feature Rice 1 LOC_Os09g20010 gene 10218 expressed protein feature Barley 1H 12_30969 SNP 15 feature Barley 1H 11_11223 SNP 78 feature Barley 1H 11_11224 SNP 100 homolog Barley 12_30969 Rice LOC_Os05g01020 7.00E-91 #00FF00 homolog Barley 11_11223 Rice LOC_Os09g20010 6.00E-50 chromosome Barley 1H #593423 URL Rice http://rice.plantbiology.msu.edu/cgi-bin/gbrowse/rice/?name=
Last updated June 22nd, 2020